Insertion junction: CLIP2.071985_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.071985
Chromosome:chromosome 17
Location:1649204
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g707800 SNRK2J (1 of 4) PTHR24343//PTHR24343:SF167 - SERINE/THREONINE KINASE // SUBFAMILY NOT NAMED; snRK1 family in Chlamydomonas, subgroup 2 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCCTAGCGCCTCAGCGCTCTACGCCGCTCGACCGGCAGTAACATAGCC
Internal bar code:ATTGTTTGATCCTTCGGTTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:909
LEAP-Seq percent confirming:9.52381
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGAAGCTGACACCTTCCT
Suggested primer 2:GATGAACGCGAATGGACACG