Insertion junction: CLIP2.071997_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.071997
Chromosome:chromosome 9
Location:3952622
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g398326 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATACTGAAATACAATTAGTTTGTGCGGCGTTGGGGTCTGGAGGCGGCGC
Internal bar code:CGTAATACTCACGGGGAAATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2229
LEAP-Seq percent confirming:44.4444
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGAACGTGGCTGTACAGG
Suggested primer 2:AGTAAGTGAGCCGCGTCAAA