Insertion junction: CLIP2.071998_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071998
Chromosome:chromosome 16
Location:6251745
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676400 HEL63 (1 of 1) K12811 - ATP-dependent RNA helicase DDX46/PRP5 (DDX46, PRP5); DEAD/DEAH box helicase 5'UTR
Cre16.g676402 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCGCCATTTGAGTCACACGCGATGAAGTAGATGCAGATTTTTCCTTAA
Internal bar code:TTCGCCCTGGACGGGTTCACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1835
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCACGGTCGTGGTCTTTC
Suggested primer 2:TGCAGAGCCAACACGTACAT