Insertion junction: CLIP2.072004_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072004
Chromosome:chromosome 8
Location:4456796
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre08.g385700 SNAPG1 (1 of 1) PTHR13768:SF2 - GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN; Gamma-SNAP, SNARE complex protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGAGCGCCCTTGTGCTCTTACCATACACCTGCATACAAAAACATACAC
Internal bar code:ATCAGTGTCGTGTGTGTAACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:452
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGCGTCCACACTGATGA
Suggested primer 2:CGTGCGACCATATTGCTGTG