Insertion junction: CLIP2.072006_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.072006
Chromosome:chromosome 8
Location:864914
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g361400 (1 of 3) PF03638 - Tesmin/TSO1-like CXC domain, cysteine-rich domain (TCR) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGGGCGAAGGGGACGACGACCGAAACAAGACGAGTGCCACACATGCAT
Internal bar code:CAGGTACGGAGCCACGATCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1047
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GATAGACCACACGCTACGGG
Suggested primer 2:AAAAGGATGATGCGGCTCCA