Insertion junction: CLIP2.072008_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072008
Chromosome:chromosome 7
Location:5539095
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g351600 HEL40 (1 of 2) PTHR24031:SF303 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL; possible helicase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGAAGTGCCCCCCTGCATGGGGGCCTGTCAACGAAAATTCGCCACTTC
Internal bar code:TTATCTTCAGGGTGAGTCTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1547
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ATACTGTAGGGCGGGGTTCT
Suggested primer 2:CAGATGAACGGCTTAACGCG