Insertion junction: CLIP2.072008_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072008
Chromosome:chromosome 7
Location:5539117
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g351600 HEL40 (1 of 2) PTHR24031:SF303 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL; possible helicase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCACTTCAGTATTTTCCTGCGACGAAACTACTACTGCAATTATAAGCA
Internal bar code:AGGTAAAAGTGTGGAGAGACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3404
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CAGATGAACGGCTTAACGCG
Suggested primer 2:ATACTGTAGGGCGGGGTTCT