Insertion junction: CLIP2.072012_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072012
Chromosome:chromosome 11
Location:3243218
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g476250 (1 of 37) PF13639 - Ring finger domain (zf-RING_2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTTAATGTAATTGAGTGGGAAGTCGGTGAGACGCAGCCCTTTGCTACG
Internal bar code:ATGCAACAACTTCGCCACCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2881
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:141
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:141

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAGAGAGTGTGTGGTGGC
Suggested primer 2:CCACATGAACTAGGCCGGTT