Insertion junction: CLIP2.072017_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072017
Chromosome:chromosome 13
Location:4578935
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g603450 (1 of 4) PF14159 - CAAD domains of cyanobacterial aminoacyl-tRNA synthetase (CAAD) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTTATGCTCGCGAAACCGTCGCGACCTGTTTTCTCCGCGCGCGGCCGG
Internal bar code:CTGCCGGACAGGACTGACAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1270
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGTTGGGAGGCTTTGT
Suggested primer 2:GAGGTTGGGGTAGCTTGGAC