Insertion junction: CLIP2.072017_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072017
Chromosome:chromosome 13
Location:4578936
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g603450 (1 of 4) PF14159 - CAAD domains of cyanobacterial aminoacyl-tRNA synthetase (CAAD) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCGAGCGGTCCCGCGCGCACTCCGGCGCGAGCTCGCGCCGAACTGTG
Internal bar code:CTACTCGGTACTTAGTATGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1765
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGTTGGGGTAGCTTGGAC
Suggested primer 2:TGTGTGTTGGGAGGCTTTGT