Insertion junction: CLIP2.072018_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.072018
Chromosome:chromosome 9
Location:4039868
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g398808 (1 of 2) PF01465 - GRIP domain (GRIP) 5'UTR
Cre09.g398845 (1 of 1) PF08507 - COPI associated protein (COPI_assoc) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAAACGAGCGTACCTCACTGGCTTCCTGGGCGTAAGACGGTGACAGGG
Internal bar code:TTATGCTAAGAGTCATAGGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:5046
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGCCACTCAAACTCCGTC
Suggested primer 2:CATTCAAGCCATCCATGCCG