Insertion junction: CLIP2.072020_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072020
Chromosome:chromosome 2
Location:4857632
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g109450 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTATAACTATGTGCCGCTGAAGGCGACAGCATAATAGCTTAGAGCACAT
Internal bar code:AATTATATGCATTGAAAAAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:972
LEAP-Seq percent confirming:11.9048
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGTCATCGGCTCACAAGG
Suggested primer 2:GTGGAAGCCTCTACCCACAC