Insertion junction: CLIP2.072023_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.072023
Chromosome:chromosome 6
Location:2629257
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g270150 MITC13,MCP13 (1 of 2) PTHR24089//PTHR24089:SF190 - FAMILY NOT NAMED // THYLAKOID ADP,ATP CARRIER PROTEIN, CHLOROPLASTIC-RELATED; mitochondrial substrate carrier protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCCCACACACATGCTGTCTTGTCCGGAATCGACCGTGGGAATCGACCT
Internal bar code:TAAAAGGGCTCCCAGGTACAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1125
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTTGCGAACTCACCCTA
Suggested primer 2:TCGTGAGTCTTGACTGGCAC