Insertion junction: CLIP2.072024_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072024
Chromosome:chromosome 12
Location:4187370
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g517800 (1 of 18) PF12906 - RING-variant domain (RINGv) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATGTCGCCCGGGGGCCCACCTGCCCATTGTCCCATCGCCCCCAGGGAG
Internal bar code:CCAAGATCATCATCGATAGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2197
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:AGATGAGCACGACTGCACAA
Suggested primer 2:TTGAACTGGATCCCCAACGG