Insertion junction: CLIP2.072025_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.072025
Chromosome:chromosome 3
Location:388538
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144747 (1 of 1) PTHR10641//PTHR10641:SF518 - MYB-LIKE DNA-BINDING PROTEIN MYB // MYB DOMAIN PROTEIN 100-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGAAGGAAGAAGCATTGCTGAGCACGCCCGGTATTCTTTGGTAGTACC
Internal bar code:GTTCAATTGGCTCCGCATACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1823
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CCACAAGTTGGCGTTGACAG
Suggested primer 2:CAATCGTGCGCATTCCTCAG