Insertion junction: CLIP2.072029_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.072029
Chromosome:chromosome 2
Location:1246805
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g081900 outside_mRNA
Cre02.g081950 (1 of 19) IPR000104//IPR000719//IPR001245//IPR002290//IPR011009//IPR020635 - Antifreeze protein, type I // Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAACCCATCGCCACAGACGTCGCCCTCATTCATCAAGCCGCTTTTCTCC
Internal bar code:ATTATTTTAGATATATGTTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4755
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:109
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:109

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGATGAGCTGGGAAGTGC
Suggested primer 2:TGTCTACGGATGCGTCGATG