Insertion junction: CLIP2.072031_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072031
Chromosome:chromosome 6
Location:2406830
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g268650 FAP279 (1 of 8) PF14580 - Leucine-rich repeat (LRR_9); Flagellar Associated Protein 279 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTGGTATGGTCTCGGTCCTGACACGGACAAGGCCTGTCCACTGCGTGC
Internal bar code:GCCGTGTTCTTCGAGTGGGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2121
LEAP-Seq percent confirming:97.3684
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGGTCTTGCAGCAGTTGA
Suggested primer 2:TCGTAGGCTGTTCGTTTGCT