Insertion junction: CLIP2.072031_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.072031
Chromosome:chromosome 6
Location:2406833
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g268650 FAP279 (1 of 8) PF14580 - Leucine-rich repeat (LRR_9); Flagellar Associated Protein 279 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCGCTTGTCCACCTTTGTCCACCTGACGCAACTCGTCTCCGTCGTTC
Internal bar code:GCCGTGTTCTTCGAGTGGGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:879
LEAP-Seq percent confirming:97.7778
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTAGGCTGTTCGTTTGCT
Suggested primer 2:ATCGGTCTTGCAGCAGTTGA