Insertion junction: CLIP2.072039_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072039
Chromosome:chromosome 11
Location:257752
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467559 (1 of 1) IPR003590//IPR006553 - Leucine-rich repeat, ribonuclease inhibitor subtype // Leucine-rich repeat, cysteine-containing subtype 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGCTGGCCGCTTCCCGTCGTGTGGGCGGACTCAGCCACTCTGGCCAT
Internal bar code:TCATTGGGTAGGCACTAGGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3342
LEAP-Seq percent confirming:51.1905
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:TACAAGGTGGTGAGCACGAC
Suggested primer 2:CGTTTGTGGGAAGGGGATCA