Insertion junction: CLIP2.072040_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.072040
Chromosome:chromosome 5
Location:182870
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g242700 SUB9 (1 of 14) 3.4.21.62 - Subtilisin; Subtilisin-like protease 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGCCCGCAGCCACCGCCGCCAGAGCCTGCGGTTCGGTTGACATTTGTG
Internal bar code:GCTCGATGGTGAATGTTTCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:183
LEAP-Seq percent confirming:5.55556
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCACGTTTCACCCGTTTTCC
Suggested primer 2:GGGAGGGTGTGTGTGTGTAG