Insertion junction: CLIP2.072041_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.072041
Chromosome:chromosome 1
Location:1658945
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g009101 (1 of 37) PF13639 - Ring finger domain (zf-RING_2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGATTCAACTGAAGGATAGGGAGCGGCGAGGCGAGGAGGCGAGGGGAGG
Internal bar code:TATGTCCAACTCTGCCTTCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1189
LEAP-Seq percent confirming:75.7576
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GCACTTTATTTAGCCCCGCG
Suggested primer 2:GCTCGCATGCTGTCTGAATG