Insertion junction: CLIP2.072048_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.072048
Chromosome:chromosome 3
Location:5614022
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185850 CPK2 (1 of 1) PTHR10584//PTHR10584:SF162 - SUGAR KINASE // SUBFAMILY NOT NAMED; putative carbohydrate kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGAGTGATGGAGATGGAGTTCGGGTACGAGAGGGCTTGAATTCAAACG
Internal bar code:AGTCTGAGATTGCATAGTGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:611
LEAP-Seq percent confirming:2.77778
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:70
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCAACACACTGGGACCTC
Suggested primer 2:AGGCTGCTTAGGGTTTGGAC