Insertion junction: CLIP2.072048_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072048
Chromosome:chromosome 3
Location:5614026
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185850 CPK2 (1 of 1) PTHR10584//PTHR10584:SF162 - SUGAR KINASE // SUBFAMILY NOT NAMED; putative carbohydrate kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTACCGCGCGCGCGGCAGCCTGTGCCTGCTCACGCCCCCGCCTCCCGCG
Internal bar code:GCGCGTAATCAGTCTGTGTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:840
LEAP-Seq percent confirming:2.15827
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:136
LEAP-Seq n unique pos:139

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCTGCTTAGGGTTTGGAC
Suggested primer 2:CTCCAACACACTGGGACCTC