Insertion junction: CLIP2.072051_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072051
Chromosome:chromosome 8
Location:433413
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre08.g358700 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGTGTGCGTGGGGTTTTGTGTCCACCGCATGGCGGATGGCCAGCTCC
Internal bar code:ATGGTAGTGGGGGTCGCGCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:188
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCTACTGACTGCCTCCTCCT
Suggested primer 2:GTGTGTGTGTACGTGTGTGC