Insertion junction: CLIP2.072056_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.072056
Chromosome:chromosome 2
Location:7471550
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392430 (1 of 1) 1.1.1.62 - 17-beta-estradiol 17-dehydrogenase / Estrogen 17-oxidoreductase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCATTACGGATGTGGGATGAAAGGTATGTCGGTGGTACATGCGTGCGGA
Internal bar code:ATGAGGCCAGAGGGGATTAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:824
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGAGTGACAGTGTCAGGG
Suggested primer 2:GACGTGGAAACCAACCTTGC