Insertion junction: CLIP2.072061_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072061
Chromosome:chromosome 17
Location:3339899
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g722750 CTAP4 Chloroplast translocon associated protein 4 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGACACTCACCCGAGGCGAGCCCCCGCGCTCCCGATGACAAGGGTGCAG
Internal bar code:GGCGGCCACTAGTATTTACTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1830
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGGGTTGTATCAACAGCA
Suggested primer 2:TAGCGTGTCAACAGTCCCAC