Insertion junction: CLIP2.072072_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.072072
Chromosome:chromosome 12
Location:1932895
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g511700 (1 of 1) K14066 - geranyl diphosphate synthase (GPS) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCGTCCTGGTTGTGATGAATGTGTGCCGGCGCGCGTACTGCAAAGCTC
Internal bar code:GCGTGGTGATTGCGTTGCATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2787
LEAP-Seq percent confirming:98.7179
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:GACAACACGCAACAAGGGAC
Suggested primer 2:CGCAGGCAATCGAGGAATTG