Insertion junction: CLIP2.072073_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.072073
Chromosome:chromosome 2
Location:4977845
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g110550 (1 of 24) PTHR10641 - MYB-LIKE DNA-BINDING PROTEIN MYB 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTCAACAGTGGCATCCGACTCGAGTTCGCCGAAACAGACTAAAAGATT
Internal bar code:GTAGGTACCAGTTTTAAATTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:390
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTGAGAGTCTGCAGCACA
Suggested primer 2:ATCTACAACCCTCCCCTCCC