Insertion junction: CLIP2.072075_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.072075
Chromosome:chromosome 16
Location:1372941
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g651923 CRI1,CRTISO1 Carotenoid isomerase; (1 of 1) PTHR10668:SF5 - BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATTACAAGCTTCGCGCCTTCTCACCGCTCCCCCGACATCCATTCACCT
Internal bar code:CTAGAGGCACGGCTGGGCTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1229
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGATTGGGAGGTAGGCAT
Suggested primer 2:CCGAAGCAAGGTTGTTCAGC