Insertion junction: CLIP2.072079_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072079
Chromosome:chromosome 6
Location:4691124
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278900 NUP88 (1 of 1) PTHR13257//PTHR13257:SF0 - NUCLEOPORIN NUP84-RELATED // NUCLEAR PORE COMPLEX PROTEIN NUP88; Nucleoporin 88 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATTCAAAATAACCGTTGTAATGCTTGAGTGTTATATATTGCACAAGT
Internal bar code:ATACGTGACACAGTCGACAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5914
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:135
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:135

Suggested primers for confirmation by PCR

Suggested primer 1:GCATACTGGGACTGCAACCT
Suggested primer 2:CGGTCCTTATGCAGTGGTGT