Insertion junction: CLIP2.072080_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072080
Chromosome:chromosome 13
Location:2832304
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre13.g582900 (1 of 77) IPR001623 - DnaJ domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCATGCGCATGCGTATTCGGTACTCGTGCAGCTGCACGCACCGTCACA
Internal bar code:CCATCTGTGAGCCCAGCTCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1321
LEAP-Seq percent confirming:2.43902
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:40
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGTCATGCAGAGGTCAA
Suggested primer 2:GACCTGAGGCAACAGTCGAA