Insertion junction: CLIP2.072085_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.072085
Chromosome:chromosome 3
Location:6057407
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g190100 EIF3B (1 of 1) K03253 - translation initiation factor 3 subunit B (EIF3B); Eukaryotic translation initiation factor 3, subunit B 5'UTR
Cre03.g800353 (1 of 1) K06631 - polo-like kinase 1 (PLK1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGCGACTTCTGCTCGGAGGCGACCTCGAGCATCGTGCCCATTCCCCG
Internal bar code:ACGGAACGGTGGAATTCTCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2976
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:GATCCGCACGTTTCACATCG
Suggested primer 2:GAGTATCCACAGCGAGGCTC