Insertion junction: CLIP2.072086_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.072086
Chromosome:chromosome 12
Location:1696032
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g486250 ARL6,ARFA1A,FAP333 (1 of 2) PTHR11711:SF181 - ADP-RIBOSYLATION FACTOR A1F; Flagellar Associated Protein 333 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATTGACAGCAGTTACCGCACCGTACGGTACAATCTTCATACACACCCC
Internal bar code:TAAGTGACGTAGTAGTTGGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1528
LEAP-Seq percent confirming:26.087
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTCTTTCCCCATCCAGC
Suggested primer 2:ATTTCAGGGCCCGCATGTAA