Insertion junction: CLIP2.072108_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072108
Chromosome:chromosome 2
Location:1976026
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800186 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTAGGAATGCTGCCACTGCTGGTGCGCTCAGACGTTTTGATGTATGGA
Internal bar code:CGAAATACTAACCTCTCGGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:551
LEAP-Seq percent confirming:35.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GACACTCACCCAGCGAGAAA
Suggested primer 2:TGCAGGCGAACATCGTAAGT