Insertion junction: CLIP2.072115_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.072115
Chromosome:chromosome 17
Location:4892860
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g735021 (1 of 6) PTHR10582 - TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGATACAATATAAAAAAACGGGGGCGCGGGGGCAGCCGCGCGAGGAGA
Internal bar code:ATGGGGGAGTAGCGGCGCATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:234
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTCCCCTGTGTAGCAAAT
Suggested primer 2:CTGTGTCCCTCATTGGCCAT