Insertion junction: CLIP2.072116_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072116
Chromosome:chromosome 9
Location:6229068
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g413500 GT90-16,GT90F16 (1 of 4) PTHR12203//PTHR12203:SF35 - KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED // SUBFAMILY NOT NAMED; GT90 family protein 16 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCATGTAACTTCCCCAATAAATAACCATCACCTTTGAAGGCCACCAAG
Internal bar code:GCATCTGGGACCTGCTTGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:103
LEAP-Seq percent confirming:4.7619
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGGGTGGGGTCTTAAGAT
Suggested primer 2:ACACAACAGCACTGGGTTGA