Insertion junction: CLIP2.072129_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.072129
Chromosome:chromosome 14
Location:2460789
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g623900 (1 of 41) IPR000719//IPR011009 - Protein kinase domain // Protein kinase-like domain outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGTAAGAGCCTTAGGTACCATGAACCGCATGAACCGCCCTGTAGACG
Internal bar code:AGGCCATGTTCTTTGTGGAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:134
LEAP-Seq percent confirming:3.44828
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TCACAGCTCTCAAGGCAAGG
Suggested primer 2:GGCTGCATTTTCACCAAGCA