Insertion junction: CLIP2.072133_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.072133
Chromosome:chromosome 4
Location:2439590
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g221650 TOP4 (1 of 1) PTHR10169//PTHR10169:SF48 - DNA TOPOISOMERASE/GYRASE // DNA GYRASE SUBUNIT A, CHLOROPLASTIC/MITOCHONDRIAL-RELATED; Topoisomerase type IV intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAGAGCCTCCCTCTGTCAGATTTGTACTGGGCAGGGCAAATTGGCACC
Internal bar code:GCCTATCAGCGGCAGGGAGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:160
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CGCATTGTCAGTTGCCAACA
Suggested primer 2:CCTGACGCACTCCATCAACT