Insertion junction: CLIP2.072159_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072159
Chromosome:chromosome 7
Location:3446260
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g335550 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCCGCAGATGGCTACCCCTACTGCGTTACTCGGCGCGGCCGGCCCCGG
Internal bar code:CCCTTAGTACAGTCGCGGGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4081
LEAP-Seq percent confirming:89.8305
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGGAGATGGATGAGAAGG
Suggested primer 2:CACACCCGTCGAACAAAACC