Insertion junction: CLIP2.072160_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072160
Chromosome:chromosome 12
Location:9380763
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541600 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACAAAGCGCACATTACCGGCAGCTCTTTCGGAGCTCGACCTTTCCCTG
Internal bar code:TCTTATAGTACACTGGGAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1298
LEAP-Seq percent confirming:80.4878
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTGCACGGGTGTTCTTC
Suggested primer 2:ATGGAGCAGTGAACCAAGGG