Insertion junction: CLIP2.072175_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.072175
Chromosome:chromosome 10
Location:4720429
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g801171 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTTAGTCACATAGTAGCAAGTCCATGAACACAGGACAGGTGAGGACGC
Internal bar code:TCTCAAGCAGCAAGCATTTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2082
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGTGCATCCATGAATGTC
Suggested primer 2:TTGCATGCTGCTGCTTGAAG