Insertion junction: CLIP2.072184_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072184
Chromosome:chromosome 9
Location:5820719
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre09.g411450 DAP1,DNAAF2,Ktu,MOT45,PF13,PRR1 (1 of 3) PF08190 - pre-RNA processing PIH1/Nop17 (PIH1); Dynein Assembly factor PIH domain 1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAACAAAGACTTGCTCATTAGTTTCACAACTACAAGGAAGCTCTGTTGCG
Internal bar code:TGCAGGAGTCATCGTTTAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:545
LEAP-Seq percent confirming:45.977
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:47
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCATCTCCTGCAGCAGTT
Suggested primer 2:TGCTACGCCCAATAACAGCA