Insertion junction: CLIP2.072187_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.072187
Chromosome:chromosome 2
Location:7264015
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g391282 XYT1 (1 of 1) K03714 - glycoprotein 2-beta-D-xylosyltransferase (E2.4.2.38); Xylosyl transferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAGCGAACGCGATGGGGCGGATGCATTCCCGCCCTTTAGGGCGCCAGT
Internal bar code:TTGTTTGGTTTAATGAATTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1149
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGTCACGACAACGGTCTT
Suggested primer 2:CACTTAGGCATGCACATCGC