Insertion junction: CLIP2.072189_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.072189
Chromosome:chromosome 10
Location:5632368
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g458800 SRR31 Scavenger receptor cysteine rich (SRCR) protein; (1 of 20) IPR001190//IPR017448 - SRCR domain // SRCR-like domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTTGCTGCTCTCAGCAGCAGGTGAGTCGCGCAGTCTTATTCATTGCTG
Internal bar code:TAGTAGATGTGGAGCCGAGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:728
LEAP-Seq percent confirming:73.3333
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGTGTGAGGGGGTATATG
Suggested primer 2:TGGTTTCCTATGTTCGGGGC