Insertion junction: CLIP2.072194_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072194
Chromosome:chromosome 16
Location:847366
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre16.g647700 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTTGGTAGTGGCGAAGCCACTAATGACTAGGGCTGACAAGCCCTAGTG
Internal bar code:ATCAATAGCGTATTTAAGAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:3500
LEAP-Seq percent confirming:44.5652
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:51
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAGGGTGGGCTAGAGAGG
Suggested primer 2:CAAGGCGTTCTAGCTGGTCA