Insertion junction: CLIP2.072198_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072198
Chromosome:chromosome 3
Location:8667043
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g209617 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGGTGGGCAATTCGAATGACCCGGCTGTTGCTGTTGAAGGCGCGAGGG
Internal bar code:ACATTAACACATGTGGGAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1899
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGACTGCACGGAGTATCG
Suggested primer 2:GGGGAACTTGAGTCGACGTT