Insertion junction: CLIP2.072200_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.072200
Chromosome:chromosome 17
Location:1455466
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g706550 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGCGCCCGCCCGCCAGGGGAAGTATAACCGCAAAGCATGTCACAAGGT
Internal bar code:TACTAACACACTTCTTTATGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3468
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:CGGAAAGGCTGTCTGTCTGT
Suggested primer 2:GCGTGCTGCGATCTTTAAGG