Insertion junction: CLIP2.072201_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072201
Chromosome:chromosome 2
Location:1191777
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g081400 BCA1 Branched chain amino acid aminotransferase; (1 of 1) 2.6.1.88 - Methionine transaminase / Methionine-oxo-acid transaminase 5'UTR
Cre02.g081450 CGL123,MRPL25,bL25m (1 of 1) PTHR33284//PTHR33284:SF1 - FAMILY NOT NAMED // RIBOSOMAL L25/TL5/CTC N-TERMINAL 5S RRNA BINDING DOMAIN-CONTAINING PROTEIN; Mitochondrial ribosomal protein L25 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTGCGTTGGTTGGAAATGCTGACGCGGTGACTCTGGAGCTGACTGTG
Internal bar code:GGTGTCGAGGCGGGGCTGTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1854
LEAP-Seq percent confirming:82.9545
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:AGATGGAGGGGCTCATTCCT
Suggested primer 2:ACCAAGACATGCTGGTACGG