Insertion junction: CLIP2.072203_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072203
Chromosome:chromosome 3
Location:1036822
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g148201 (1 of 10) IPR013781 - Glycoside hydrolase, catalytic domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCCGCCGCCGCGACTACTGGTGTTGCTGGCGCCAGCGCCAGCATCTAC
Internal bar code:TCTCTACTGCTTGTCTCGTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:950
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGGATCCCAAGTGCTCA
Suggested primer 2:AAACTCAGGACGGAGGCTTG