Insertion junction: CLIP2.072206_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072206
Chromosome:chromosome 8
Location:1624723
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre08.g365800 (1 of 1) IPR000104//IPR001077//IPR016461//IPR029063 - Antifreeze protein, type I // O-methyltransferase, family 2 // O-methyltransferase COMT-type // S-adenosyl-L-methionine-dependent methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCATACCTTCCCTCCACCTCCTTTCATTCCCCCTCCTCCCCCAGCTC
Internal bar code:ATGAGTGCATGGACTCCAGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:362
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCCATGTTCTGGGATGCT
Suggested primer 2:TCTCCGACCCTTCATACCGT